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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lsa019076 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family |
bHLH |
Protein Properties |
Length: 306aa MW: 34785.8 Da PI: 9.4521 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
gnl|UG|Lsa#S58684426 | PU_ref | Unigene | View CDS |
PUT-187a-Lactuca_sativa-19593 | PU_unref | plantGDB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 43.2 | 6.8e-14 | 92 | 143 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+e++k+L+
Lsa019076 92 QRMTHIAVERNRRKQMNHHLSVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 143
79****************************...9******************995 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MGLETLSSNN ELLNLIIYNT ATPFSFHETT TFHNHHPPPM EIITYNFPSP TAAQPHSSME 60 NDQKSAVEGV GRKKKRRKKG RVSKNKEEAE TQRMTHIAVE RNRRKQMNHH LSVLRSLMPE 120 SYVQRGDQAS IVGGAIEFVK ELEHLLQSLE AQKFRLTQQG DAIIHDQNSN FATNPTQGRD 180 IPQLPLHFYK LFSYPQNSSQ YPNKYTSKHK ATIADIEVNL IHSHANLRIV LQKRLTPLSK 240 MVVFLQKSRL SVLHLNITTL DPLVLYSISL KVEEGCWLNS ADQIAGAVHQ ILALIEEEAI 300 LCIDTK
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 71 | 78 | RKKKRRKK |
2 | 72 | 76 | KKKRR |
3 | 72 | 77 | KKKRRK |
4 | 72 | 78 | KKKRRKK |
5 | 73 | 77 | KKRRK |
6 | 73 | 78 | KKRRKK |
7 | 92 | 103 | RMTHIAVERNRR |