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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lsa016738 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family |
bHLH |
Protein Properties |
Length: 251aa MW: 28147.1 Da PI: 8.2528 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
gnl|UG|Lsa#S58688649 | PU_ref | Unigene | View CDS |
PUT-187a-Lactuca_sativa-37530 | PU_unref | plantGDB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 37.4 | 4.5e-12 | 80 | 126 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
++h+ +ErrRR+riN +++Lr l+P++ K++Ka+ L ++++ +k+L
Lsa016738 80 KSHSDAERRRRERINAHLDTLRGLVPSN-----DKMDKATLLAEVIHQVKQL 126
58*************************8.....7************999998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MDFYSPNHIF SNLESIVDDR FLGNLSGFNG DFENVDGLFS KSSQSLVLDE EKGELVKAQP 60 KVIGKKIGLI SEEKSLAALK SHSDAERRRR ERINAHLDTL RGLVPSNDKM DKATLLAEVI 120 HQVKQLKINA THASKGLLMP EDTDELKVEK LNNGGLVFHT SFCCKKRPEL LADVRRSLSS 180 LKVKIERAEL STLGDHVKMV FDFTKTSNGT MDEDIISSIH DAFTSVMEKG SISPEYSPRT 240 TLPNKRRRYS L
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