PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lsa015449
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
Family bHLH
Protein Properties Length: 278aa    MW: 31398 Da    PI: 5.0369
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Lsa#S58682876PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.48.2e-11154202255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                r+++  ++rrRR ri  +++ L +llP++     k  +K  i+   +eYIk+Lq
  Lsa015449 154 RQKATDADRRRRTRIAASLDALEDLLPQP-----KEGNKTNIVDDCIEYIKYLQ 202
                889999***********************.....679****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.7E-10150215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.2E-11151211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.884152201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-8154202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.9E-4158207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MDEHVVQNDC DLQLSSSTLE GNFNYAPHLG ESSLYQHITK AEDCDSYSAP QWIGYQQMPP  60
YYVEYLVGNG ISDMQGEIPH DTNGIGCSFT SEESFLSMEA HQVRQSRCQH EEILANNFRN  120
TQHQICYQKQ GLDTAAQHKP NMSGITTSRR TYMRQKATDA DRRRRTRIAA SLDALEDLLP  180
QPKEGNKTNI VDDCIEYIKY LQLHMKELSQ NRLVGEPTSN HLTYLEGYGA YLVDEKTATA  240
SGPLEEMLGN LMETSPSAAI KLLESRGLYM MPINARSS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023738468.10.0transcription factor bHLH7-like
TrEMBLA0A2J6K5780.0A0A2J6K578_LACSA; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.15e-11LJRHL1-like 2