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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lsa013456 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family |
bHLH |
Protein Properties |
Length: 311aa MW: 32532.4 Da PI: 5.9121 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
gnl|UG|Lsa#S58687769 | PU_ref | Unigene | View CDS |
PUT-187a-Lactuca_sativa-55566 | PU_unref | plantGDB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 30.2 | 8.2e-10 | 160 | 204 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
h+++Er RR+ri +++ L+el+P+ + K + a++L + v+Y+k L
Lsa013456 160 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 204
99***********************55......****************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 311 aa
Download sequence Send
to blast |
MANSNPSDGS ADDFFEQILG FPAYPGGATD PNLSVNEGGM GGPGGNSMML QLSSAGDVGS 60 GHHHLGGGVG VGGGGAGGGF HFPLGLSLEH GKGGFLKMDD ASGSGKRFRD DVVDSRVSSS 120 GFQGQSMGGG GGNTVQTTPN PPTARPTRVR ARRGQATDPH SIAERLRRER IAERIRALQE 180 LVPSVNKTDR AAMLDEIVDY VKFLRLQVKV LSMSRLGGAS AVAPLVTDIP ISSVEEEAGE 240 GGRNQPAWEK WSNDGTERQV AKLMEENVGA AMQFLQSKAL CIMPISLASA IYHTQPPDST 300 SIIKPESEPP L
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Functional Description ? help
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Source |
Description |
UniProt | Required for ovule fertilization. {ECO:0000269|PubMed:15634699}. |