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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lsa012872 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family |
bHLH |
Protein Properties |
Length: 256aa MW: 28700.8 Da PI: 9.4818 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
gnl|UG|Lsa#S58678711 | PU_ref | Unigene | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 46.7 | 5.6e-15 | 71 | 124 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
++ +hn+ Er RR+++N+ +e Lr++lP + + ++kK+s i+ +Av+YI +Lq
Lsa012872 71 KKLNHNASERDRRKKVNNLYESLRSVLPMS-NDRKKKVSIPGIVSRAVKYIPELQ 124
6789*************************5.478888***************998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 256 aa
Download sequence Send
to blast |
MLALSSPLFS TPYGWPLADN FSKVCGDPDS TQSFLEFPSS DQIQLDFTPE NSSSFGGAVN 60 RGKGDGMNVV KKLNHNASER DRRKKVNNLY ESLRSVLPMS NDRKKKVSIP GIVSRAVKYI 120 PELQKEVETL LHKKEKLWSY SSSTENIYIK KQSAKDAIID EKSSIVSSVS VLSEKEAVIQ 180 LISSTKSSVK NKDIVFLSKV LEKLEEEEDG FILLNATTFK CVGEGMLLNT IHFQVQGNNK 240 IDAQKMKEKL RSFQQQ
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