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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lsa012711 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family |
bHLH |
Protein Properties |
Length: 235aa MW: 26493.9 Da PI: 5.4695 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
gnl|UG|Lsa#S58679821 | PU_ref | Unigene | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 39.7 | 8.7e-13 | 81 | 127 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
+ rE++RRd++N++f+eL e+l + +s+K +K+ iL A++ + +L
Lsa012711 81 KACREKKRRDKLNERFQELNEMLDPG---RSPKTDKSVILADAIRMVTQL 127
678**********************9...9***************99988 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 235 aa
Download sequence Send
to blast |
MVAPEEDDNS NCFFDFSLIE QFPVPGGELP SLDTDFQWSS DPFPDSANLS KEFVDSLGKS 60 NTTKEDESRK RAHPGSCSDS KACREKKRRD KLNERFQELN EMLDPGRSPK TDKSVILADA 120 IRMVTQLRND AAKLKDSSQD LLVKINELKV EKNELRDEKQ KLKSDKERLE QQLKAATTYC 180 GPPTAFYPPA HPVIPVSTPN KFMPFMGFQG VPMWQFASPN AVDTSKDHVL RSPLA
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 68 | 88 | RKRAHPGSCSDSKACREKKRR |
2 | 85 | 90 | KKRRDK |