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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lsa009233 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family |
bHLH |
Protein Properties |
Length: 217aa MW: 24263 Da PI: 4.7225 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
gnl|UG|Lsa#S58689371 | PU_ref | Unigene | View CDS |
PUT-187a-Lactuca_sativa-5145 | PU_unref | plantGDB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 20.2 | 1.1e-06 | 167 | 203 | 13 | 54 |
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
R+++++ + Lr ++P++ k++s +++L +Av+Y+k L
Lsa009233 167 RREMKKMVDSLRGIVPNS-----KRMSTVDVLDEAVKYLKTL 203
6789*************9.....89***************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 217 aa
Download sequence Send
to blast |
MQSDQHHLLP FPNPPPFTSF FGQNVDFGQN VDFQPSKICP RNFIIFDRTD NRSQIMYHPS 60 VPVPAPGYIH VTRNDENASR EVESIMKEDS ADIDILMSFE DEEDEGEEGY EEEEEVSTAR 120 THGNDEIDTA DSCSSRLPGK GSGRGRGSGL GLSMASCKSS GVSDRKRREM KKMVDSLRGI 180 VPNSKRMSTV DVLDEAVKYL KTLKVELQNV SVVNMKN
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