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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lsa007224 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family |
bHLH |
Protein Properties |
Length: 182aa MW: 18994.6 Da PI: 6.522 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
gnl|UG|Lsa#S58676690 | PU_ref | Unigene | View CDS |
PUT-187a-Lactuca_sativa-47696 | PU_unref | plantGDB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 22.2 | 2.5e-07 | 6 | 42 | 14 | 55 |
HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq
Lsa007224 6 ERIAERMKSLQELVPNA-----NKTDKASMLDEIIDYVKFLQ 42
58999***********8.....6******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 182 aa
Download sequence Send
to blast |
MAVKAERIAE RMKSLQELVP NANKTDKASM LDEIIDYVKF LQLQVKVLSM SRLGGPAPLV 60 ADISTEGGRD ALEGGAAAGR SNNGTSSSNN DTMTVAENKV VKLMEEDMGS AMQYLQGKGL 120 CLMPISLATA ISTATCHPSS SRNNHQLLGG GPSSPNVSVL TAQSANGIMP PEVSPSKNPP 180 PS
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Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By cold, UV, ethylene (ACC), flagellin, jasmonic acid (JA), and salicylic acid (SA) treatments. {ECO:0000269|PubMed:12679534}. |