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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lsa006953 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family |
bHLH |
Protein Properties |
Length: 314aa MW: 35204.1 Da PI: 7.5007 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
gnl|UG|Lsa#S58680217 | PU_ref | Unigene | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 24.3 | 5.5e-08 | 41 | 88 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
+ rE+ RRdr+N+ f eL + l ++ +K +Ka+iL +++ +++L
Lsa006953 41 LQKADREKLRRDRLNEQFTELGKTLDPD----RPKFDKATILCDTIQMLNDL 88
56778********************997....79************999887 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MDNRLPPNSE KFHLAPPDNR PPPNQLNAEL RPGFEHKDRK LQKADREKLR RDRLNEQFTE 60 LGKTLDPDRP KFDKATILCD TIQMLNDLTA QVSRLKSEYT TLTEESRELT QEKHDLREEK 120 ASLKSDIENL NLQYQQRVRA SSSIYPWGGH MDQSVVMQPH PHPHPPTYPY PIPMQMPMPP 180 MHHPPIQPYP FFGNQNPSNP CSTFFQYVSP PPVHQPSSRS HVSTRQPSKN KSSSGKNEDS 240 NDVATELELK MPGSTLDQEG SGGESKLKKS HRKENSISDE SSLSPSGWAA SHTVQASSSN 300 SVVGGLNGNG GGHP
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