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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lsa006688 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family |
bHLH |
Protein Properties |
Length: 354aa MW: 39468.5 Da PI: 6.5071 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
gnl|UG|Lsa#S58682562 | PU_ref | Unigene | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 43.8 | 4.5e-14 | 141 | 192 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+e++k+L+
Lsa006688 141 QRMTHIAVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 192
79****************************...9******************995 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 354 aa
Download sequence Send
to blast |
MALETLSSNE LLNFIIYDTI SATPFSCNDS SETTTTNTNP CSSFFYHLDN ENPNPPLNQL 60 CQELTGAAAA MEIMSSTSSL TTTTTKMSMA VQAYCGGKVP EKNYSNNNNG NNPNLGIQGG 120 GKKKRRRRPR VSKNKEEAET QRMTHIAVER NRRKQMNEHL AVLRSLMPES YVQRGDQASI 180 VGGAIEFVKE LEHLLQSLEA QKFILSQQQQ QQQEDEGGHN NNFNESSTPP PFSQFFSYPQ 240 YTCSQIPNKY TSKSKAAIAD IEVTLIETHA NIRILSHKRL TQLSKMVACF QTLHMSVLHL 300 NVTTLDPLVL YSISVKVEEG CRLNSADEIA GAVHQMLRII EEEATLSLCV DSIN
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 121 | 126 | KKKRRR |
2 | 121 | 127 | KKKRRRR |
3 | 122 | 127 | KKRRRR |
4 | 141 | 152 | RMTHIAVERNRR |