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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lsa006633 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family |
bHLH |
Protein Properties |
Length: 192aa MW: 20915.7 Da PI: 6.5023 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
gnl|UG|Lsa#S58676190 | PU_ref | Unigene | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 44.2 | 3.5e-14 | 37 | 83 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
++h+e+E+rRRdriNs +++Lr ++ ++ K++Ka+ L k+ve++k+L
Lsa006633 37 KNHSEAEKRRRDRINSHLATLRNVVSTS-----DKMDKATLLGKVVEHLKEL 83
78************************97.....7****************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 192 aa
Download sequence Send
to blast |
TGGVGVLGLG FSQCFGGGGG GNRGGEWEDG KGGNASKNHS EAEKRRRDRI NSHLATLRNV 60 VSTSDKMDKA TLLGKVVEHL KELKSETMEL SKMCTIPTDL DEVIIDLDSN IGNSSNNVFI 120 KASVCCDDRP ELFSEIKQAL QSLRLTMVQA EMTCLGGRIK CNFIFCVTND THENEMITLK 180 QSLSRIVSTS SW
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