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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lsa005287 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family |
bHLH |
Protein Properties |
Length: 267aa MW: 30158.6 Da PI: 5.6528 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PUT-187a-Lactuca_sativa-3880 | PU_ref | plantGDB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 25.1 | 3.2e-08 | 40 | 89 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
r++ + rE+ RRd++N+ f eL ll ++ +K++K++i +++ +k+L
Lsa005287 40 RKVQKADREKLRRDKLNEQFIELGHLLDPD----RPKNDKSSIIIDTIQILKDL 89
5677889******************99997....79**************9998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 267 aa
Download sequence Send
to blast |
MDQWNAKLEL HQQQYQHISN SHSDQRETAE VEVKDTSDAR KVQKADREKL RRDKLNEQFI 60 ELGHLLDPDR PKNDKSSIII DTIQILKDLT NEVNRLKAEC SALSEESCEL IQEKNELREE 120 KSSLKSDIEN LNTQYQQRVG VMYPWGGIDP SSVVMPPPFS YPVALPVPAG PLPIHPFPFY 180 ANHNPPGASI MPYPNPNPAN YHINNQTLPV YVSRSSKQES GNKSSEQFRG SNSNDEKGDN 240 SSDVVTDLEL KTPGSQVKRL LLPFGKS
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