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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lsa005032 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family |
bHLH |
Protein Properties |
Length: 382aa MW: 39651.8 Da PI: 5.9634 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PUT-187a-Lactuca_sativa-20613 | PU_ref | plantGDB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 37.3 | 5e-12 | 204 | 249 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq
Lsa005032 204 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 249
99***********************8.....6******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 382 aa
Download sequence Send
to blast |
MQESQMSLQD LQNDTNGFDQ TVTHDDFLDQ MLSGLQTTVS WPDISAANGG GGQNKSTLPW 60 DVDHFDDQSA FLSSKLRQHQ ITAAGGARTP SSAAKSLQLS RGLAPSGESG LFQNDNIDDS 120 SFKSPIGDNN SIQNLFHGFT GSLTSNQTQP FRNLPVQNFG SPGAAAAAAV MSQVQTASAT 180 PGGGAPSQPR QRVRARRGQA TDPHSIAERL RRERIAERMK ALQELVPNAN KTDKASMLDE 240 IIDYVKFLQL QVKVLSMSRL GGAGGGNGGG GVAPIVAESG GAGRSSNGTT SSSNNETMAV 300 TENQVVKLME EDMGSAMQYL QGKGLCLMPI SLATAISTAT CGTRSNHPLG GGGGGEGGGP 360 SSPNMSVLTV QSANGASVKD SP
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Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By cold, UV, ethylene (ACC), flagellin, jasmonic acid (JA), and salicylic acid (SA) treatments. {ECO:0000269|PubMed:12679534}. |