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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lsa003534 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family |
bHLH |
Protein Properties |
Length: 272aa MW: 30242.4 Da PI: 4.7972 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
gnl|UG|Lsa#S58676762 | PU_ref | Unigene | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 33.1 | 1e-10 | 198 | 238 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
++RR+riN+++ L++l+P+ +K++ +++Le+Av+Y+k Lq
Lsa003534 198 KKRRERINERLRILQSLVPNG-----TKVDISTMLEEAVQYVKFLQ 238
9******************97.....8******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MESVSTLLEG ERNYFSGTYV SEEADFMAQL LGNFSTKSPK TSTFEDSSSS SSAFWSQSHH 60 ESTMKDDYEA SISISDNANT NSLLFPTSSG ESYLSISSSG GNNKRGISVI PFFSKMEGEE 120 ATEFDNMTPS SRKRSYSFDD VQMGWKKTKF TSMNDSDDDS NRLQDLSPRP QGVPMANSSG 180 KKRASNGSAT DSQSVYAKKR RERINERLRI LQSLVPNGTK VDISTMLEEA VQYVKFLQLQ 240 IKLLSSDDLW MYAPLAYNGM DIGLDITLPS PR
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 180 | 200 | KKRASNGSATDSQSVYAKKRR |