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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lsa003371 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family |
bHLH |
Protein Properties |
Length: 184aa MW: 20301.4 Da PI: 4.3696 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
gnl|UG|Lsa#S58689091 | PU_ref | Unigene | View CDS |
PUT-187a-Lactuca_sativa-54256 | PU_unref | plantGDB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 16.2 | 2e-05 | 133 | 171 | 13 | 55 |
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
Rd++++ L+ ++P ++ ++ +++L +Av+Y+ksL+
Lsa003371 133 RDKMKKMVKSLKGIVPGV----NGGMNTVDVLDEAVKYLKSLK 171
7****************8....799***************995 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 184 aa
Download sequence Send
to blast |
MGSGYFPDRN LSSFFGQNVD FQPARDCPRN FIIFDRTDNQ SRIVYHPDTT TSTMPVRKDE 60 NAPGVMNEDL ADIDALLSLE DEEEEYEEGD DVSTGRTGGY DGSDTSDTCS SSRRNGGPGV 120 FLGYEVKDSE RKRDKMKKMV KSLKGIVPGV NGGMNTVDVL DEAVKYLKSL KVEAQKMGVG 180 DFQG
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