|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lsa000661 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
|
Family |
bHLH |
Protein Properties |
Length: 239aa MW: 27043.7 Da PI: 10.3672 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
gnl|UG|Lsa#S58675412 | PU_ref | Unigene | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 12.3 | 0.00031 | 87 | 135 | 2 | 54 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
+ + erE+ Rd +N+ f eL + l + ++ + K++ L+ +++ +++L
Lsa000661 87 KIHKAEREKLKRDYMNDLFLELTKALEPT----NQNNGKSSALTDTIRILRDL 135
667889********************997....67777888888888777765 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 239 aa
Download sequence Send
to blast |
XHRRIPATRL RVPSSINNTP FIFKHTIQLF YSILSTAHLQ FAEVITSTLR LNLSRSAPMD 60 ENVDTTKKKS IGRSSLSKKN GAKVHRKIHK AEREKLKRDY MNDLFLELTK ALEPTNQNNG 120 KSSALTDTIR ILRDLIAQVE SLKKENSVLL AESQYVAIEK NELKEENVAM EAQIKRLQSQ 180 IDQAAGQVVG PVFVVPIQND PKLYTEPKIG SNVSKPHARY PLPSDSWPFN ILSEQGRTD
|