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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lsa000472 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family |
bHLH |
Protein Properties |
Length: 267aa MW: 28990.5 Da PI: 7.707 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
gnl|UG|Lsa#S58685683 | PU_ref | Unigene | View CDS |
PUT-187a-Lactuca_sativa-53168 | PU_unref | plantGDB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 33.3 | 8.8e-11 | 150 | 197 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++l+P + +k Ka +L + ++YI+sLq
Lsa000472 150 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 197
8*************************9....677*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 267 aa
Download sequence Send
to blast |
MDPPIINESS FSVANPSSYS LTGIWPFSSV NGGRNESLGL KMSTLISRLG EPNNNGDDES 60 TVTEHSGGGG GGGGRKRMDV NFEDESSKIT STSSGNDLSK FHGKRMKISG SKDDLCGSKI 120 EQKGSESHNL TEPPKDYIHV RARRGQATDS HSLAERARRE KISERMKILQ DLVPGCNKVI 180 GKALVLDEII NYIQSLQHQV EFLSMKLEAV NARMNSSVEG FPTKDLVTPP IDAARLLFGS 240 QAARGFGPGS EPEWLHMQLG SRFGRAT
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