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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lsa000323 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Family |
bHLH |
Protein Properties |
Length: 297aa MW: 33677.8 Da PI: 7.7447 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
gnl|UG|Lsa#S58678336 | PU_ref | Unigene | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 25.5 | 2.4e-08 | 182 | 229 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+++Er RR +iN+++ L++++P + k + a +L + ++Y++sLq
Lsa000323 182 SHSIAERVRRGKINERLRCLQDIVPGC----YKSMGMAVMLDEIINYVQSLQ 229
8*************************8....3569999***********998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 297 aa
Download sequence Send
to blast |
HPERQPSWAN LIPALYYKKD SYMEGFTSNF HSRKPSYSFI DIDQSMEFLN QFSVQYDNPN 60 LNSQSLMGFS NDNFLYQQVL PPFDHQFVQS FQPVSQYEKK NIMVIHEPVA TGPTISGKRK 120 SMDVSASSSG NSSSHPVPEN EINNEKKYQN SGKGKRVKAS ANEEAPKEVV HVRARRGQAT 180 DSHSIAERVR RGKINERLRC LQDIVPGCYK SMGMAVMLDE IINYVQSLQN QVEFLSMKLT 240 EASIFHSFDS SDSKQMDILQ MGNATQGVKM KRLEERGEIG PVDLSFGSYP SLPYHTT
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