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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj6g3v2274290.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | NAC | ||||||||
Protein Properties | Length: 185aa MW: 21547.4 Da PI: 7.0587 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 95.2 | 1e-29 | 16 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l pG++F+Ptde lv++yLk++v g++l++ e+i+++d++++ePw Lp k +++ fF++ + ++ r++ sg W+at k k+v+ Lj6g3v2274290.1 16 LLPGYKFDPTDEVLVDFYLKRRVFGQPLPF-EIIPDFDVFQIEPWGLPgGDGKIFNQRKCFFHNIGGRDL-ESLDIRVAGSGEWRATKKGKNVH 107 579***************************.99***************5444444456677777766654.57899999********9999998 PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++e+vg k+tL f++ + + +++t+W+mhe+rl Lj6g3v2274290.1 108 IHqNNEVVGKKNTLHFWEVQGSCARRTEWMMHEFRL 143 7758888***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.14E-34 | 13 | 162 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 34.918 | 16 | 163 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.1E-16 | 18 | 143 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
MEDLMTYEDD DGIVRLLPGY KFDPTDEVLV DFYLKRRVFG QPLPFEIIPD FDVFQIEPWG 60 LPGGDGKIFN QRKCFFHNIG GRDLESLDIR VAGSGEWRAT KKGKNVHIHQ NNEVVGKKNT 120 LHFWEVQGSC ARRTEWMMHE FRLASIANPS KVTKWAVYRI FQNKDLKKVT NSNKYNQDSY 180 NDVEG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-20 | 9 | 143 | 8 | 140 | Stress-induced transcription factor NAC1 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj6g3v2274290.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027352865.1 | 1e-57 | NAC domain-containing protein 83-like |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13413 | 11 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 1e-32 | NAC domain containing protein 83 |