 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Lj6g3v1812030.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
| Family |
TALE |
| Protein Properties |
Length: 376aa MW: 42245.5 Da PI: 6.5037 |
| Description |
TALE family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj6g3v1812030.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 28.6 | 2.5e-09 | 302 | 338 | 19 | 55 |
HHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 19 FeknrypsaeereeLAkklgLterqVkvWFqNrRake 55
+k +yps++++ LA+++gL+++q+ +WF N+R ++
Lj6g3v1812030.1 302 HYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 338
45679*****************************885 PP
|
| 2 | ELK | 41 | 3.8e-14 | 258 | 279 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
ELK qLlrKYsgyLgsLkqEF+
Lj6g3v1812030.1 258 ELKGQLLRKYSGYLGSLKQEFM 279
9********************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009934 | Biological Process | regulation of meristem structural organization |
| GO:0048440 | Biological Process | carpel development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 376 aa
Download sequence Send
to blast |
MEGNNSNCNG PSSSYLMAFG ENSGGLCPMS MMMMPLVTSH HQINPPNPHH HHNNNNNNAN 60
TNNCLFLPIP SSTNCNSSAS PSIMLDNNTT PTNNPGLGYY FMESDHHHHN NNNGSSSSSS 120
PAVKAKIMAH PLYQRLLAAY VNCQKVGAPP EVVARLEEAC GSAVGMAGDA VGSGCIGEDP 180
ALDQFMEAYC EMLTKYEQEL SKPLKEAMLF LQRIEFQFKN LTVSSDVGCN EGTERNTGSS 240
EEDADLYNMI DPQAEDRELK GQLLRKYSGY LGSLKQEFMK KRKKGKLPKE ARQQLLEWWS 300
RHYKWPYPSE SQKLALAEST GLDQKQINNW FINQRKRHWK PSEDMQFMVV DPSHPHYYMD 360
NVMSAPFPMD LSNHML
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 273 | 282 | LKQEFMKKRK |
| 2 | 279 | 283 | KKRKK |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: First expressed in the embryo proliferation stage, increases during early somatic embryo development and decreases thereafter. |
| Uniprot | TISSUE SPECIFICITY: Expressed mainly in embryonic tissues. Weakly detected in stems and hypocotyl. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Possible transcription activator involved in early embryonic development. Probably binds to the DNA sequence 5'-TGAC-3'. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY790246 | 0.0 | AY790246.1 Lotus corniculatus var. japonicus homeobox knotted-1-like protein KNOX1 (KN1) mRNA, partial cds. |
