|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lj6g3v0607190.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
Family |
MYB |
Protein Properties |
Length: 299aa MW: 33853.1 Da PI: 9.4752 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj6g3v0607190.1 | genome | Kazusa | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 24 | 9.3e-08 | 32 | 76 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
+WT+ E +l+ +a + + ++ +W ++a++++ g+t +++ +
Lj6g3v0607190.1 32 KWTPAENKLFENALAVYDKDtpdRWYRVAEMIP-GKTVVDVIKQYK 76
8********************************.******998886 PP
|
2 | Myb_DNA-binding | 44.7 | 3.1e-14 | 139 | 183 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT+eE++l++ + k++G+g+W+ I+r + +Rt+ q+ s+ qky
Lj6g3v0607190.1 139 PWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 183
8*****************************99************9 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 299 aa
Download sequence Send
to blast |
MKWEMEILPP APYIHNPNNS TNWLLEDNRN TKWTPAENKL FENALAVYDK DTPDRWYRVA 60 EMIPGKTVVD VIKQYKELEV DVCNIEAGLV PIPGYSSTTS PFTLDWVNTP PGYDGFKGLT 120 AKRSSSGRLP DQERKKGVPW TEEEHKLFLL GLKKYGKGDW RNISRNFVIT RTPTQVASHA 180 QKYFIRQLSG GKDKRRASIH DITTVNLTET TRTTPNSEDS KRSTSPQNSA MLSGLRGPDS 240 ASAGLHFQWN NTQPNAVPTI APNPVHEQQF MSPYGLNSYG FKMPGQNYYL GPQTQNMVF
|
Expression --
Description ? help
Back to Top |
Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Detected in the apical inflorescence meristem, in bract primordia arising in its periphery and in floral meristems produced in the axils of bracts (stages 0-3). From stage 3 to stage 8, detected in all floral organs irrespective of their dorsoventral positions. From stage 9, barely detectable in bracts, sepals, and stamens. In the corolla, however, expression was maintained and enhanced in some regions. Within ventral and lateral petals at stage 9, asymmetric pattern of expression with high levels of transcripts in the inner epidermis of the furrow and very reduced levels in the remaining cell layers. In the dorsal petals, from stage 9 onward, detected but with a more even distribution across cell layers than in the ventral petal. {ECO:0000269|PubMed:11937495}. |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Involved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}. |