 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Lj5g3v2045620.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
| Family |
TCP |
| Protein Properties |
Length: 223aa MW: 25288.1 Da PI: 8.1397 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj5g3v2045620.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 67.9 | 3.5e-21 | 1 | 107 | 38 | 133 |
TCP 38 eLGfdkdsktieWLlqqakpaikeltgt.....ssssaseceaesssssasnsssg...............kaaksaakskksqksaasalnla 111
+L fdk+s+t+eWL+++++ ai+el+++ ss+s+++ +++++ + + +s+ k +++++ ++l+ +
Lj5g3v2045620.1 1 MLEFDKPSNTLEWLFTKSESAIQELARSkncscSSNSNNNPSNNNK---------SlfgggdnhngtnsirGRGNSKLKWTTQRDQDVCVLQNK 85
89**************************555441112211112222.........133334444456777577777779*************** PP
TCP 112 kesrakarararertrekmrik 133
kesr++arararert km +
Lj5g3v2045620.1 86 KESRERARARARERTCYKMLED 107
******************9776 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 223 aa
Download sequence Send
to blast |
MLEFDKPSNT LEWLFTKSES AIQELARSKN CSCSSNSNNN PSNNNKSLFG GGDNHNGTNS 60
IRGRGNSKLK WTTQRDQDVC VLQNKKESRE RARARARERT CYKMLEDQRC PANTTQIMHQ 120
LRSSSPIQLL QPYPHLMDNS EAVSGGGGGD GFNVIEESIM IKRNMMSSNS HPHENHHLAI 180
PNKEAGFNNN YIDYPLLQPY STTPNWEIAT MNMNLSTCFM NQW
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 88 | 98 | RERARARARER |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP010441 | 0.0 | AP010441.1 Lotus japonicus genomic DNA, chromosome 5, clone: LjT32M13, TM1651, complete sequence. |
