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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj5g3v2045560.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
CPP |
Protein Properties |
Length: 483aa MW: 52595 Da PI: 8.2754 |
Description |
CPP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj5g3v2045560.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCR | 50.3 | 4.7e-16 | 200 | 238 | 2 | 40 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
++k+CnCkkskClk+YCeCfa+g++C+e C C +C N+
Lj5g3v2045560.1 200 SCKRCNCKKSKCLKLYCECFASGVYCTEPCMCRNCLNQP 238
689**********************************86 PP
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2 | TCR | 49.2 | 1.1e-15 | 285 | 323 | 1 | 39 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39
++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce CkN
Lj5g3v2045560.1 285 RHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEACKNA 323
589***********************************7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 483 aa
Download sequence Send
to blast |
MQPVNLAASG SEHGIQYHPN GPITGQTQNN LPSVALMTSN PSEKMNDELL QATYRGMRRS 60 LDYEMASVQR KNSGGSSHIS SSTAKSDERG IENPLLPTKH TCDSHLNPLA TLKDYKSSKG 120 EPMSSQMQPN LPSSTSSMLL SSRQEGPQSM ENDLEPSEGE VQPAEDYTQS PGYMADEDFH 180 PNVPKKKRRK LELSGGGESS CKRCNCKKSK CLKLYCECFA SGVYCTEPCM CRNCLNQPIH 240 AETVLQARKQ IESRNPLAFA PKVIRSSVST PETRDDPNKT PASARHKRGC NCKKSSCLKK 300 YCECYQGGVG CSISCRCEAC KNAYGRKDGS GPSEIEAEPE EETKAREKSE VGKASQKTNI 360 QNTEDQSECA LPTTPSRRLL PLPFSSDGNP SRSFIATISA SGLIASQKLG ESNALQSQVT 420 LEKPFQTVPD DDDSSGHCIK ISSPKGKRIS SPRCENGSPH TRRGGRKLIL QSIPSFPSLA 480 PPH
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 183 | 190 | PKKKRRKL |
2 | 184 | 188 | KKKRR |
3 | 184 | 189 | KKKRRK |
4 | 185 | 189 | KKRRK |
Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Expressed at the late stage of pollen development in tricellular and mature pollen. {ECO:0000269|PubMed:18057042}. |
Uniprot | TISSUE SPECIFICITY: Ubiquitous but expressed mostly in all the aerial organs with highest expression in flowers. {ECO:0000269|PubMed:10769245, ECO:0000269|PubMed:18057042}. |
Functional Description ? help
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Source |
Description |
UniProt | Plays a role in development of both male and female reproductive tissues. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP010442 | 0.0 | AP010442.1 Lotus japonicus genomic DNA, chromosome 5, clone: LjT127E18, TM1719, complete sequence. |