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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj5g3v1937410.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
ERF |
Protein Properties |
Length: 271aa MW: 28960 Da PI: 8.7915 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj5g3v1937410.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.1 | 2.9e-20 | 39 | 88 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a++ a+++++g
Lj5g3v1937410.1 39 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDDAALRFRG 88
7********.**********7.....337*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MFVYVIFVLI GTATEAATTA TSSEASASPS EESGERRRRY RGVRQRPWGK WAAEIRDPHK 60 AARVWLGTFD TAEAAARAYD DAALRFRGNR AKLNFPENVA PVAPVRPMNV HAFPTIRTTV 120 SASPATLYSP APPQPPIFPF QGQGTSDSIR DYWEYSQLLK GSGDIHGLEQ WFYESQMAAL 180 HSSQQMAALH SSSSSLLSPS QSLSLSSSSS PTAFSPSSQL SSASFPLFSG QQVGLFRPPG 240 DPSRGGGDGG SGSGFPPSTW SDTSGYPPPP G
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB378637 | 4e-54 | AB378637.1 Lotus japonicus LjERF17 mRNA for transcription factor AP2-EREBP, complete cds. |
GenBank | AP009704 | 4e-54 | AP009704.1 Lotus japonicus genomic DNA, chromosome 2, clone: LjT11L13, TM1756, complete sequence. |