 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Lj5g3v1698980.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
| Family |
NAC |
| Protein Properties |
Length: 596aa MW: 65609.1 Da PI: 4.4324 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj5g3v1698980.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 153 | 1.4e-47 | 5 | 132 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkdke 91
l pGfrFhPtdeelv +yLk++v+g+ ++ + i vd+yk+ePwdLp +k+k+++ ewyf+s dkky + ++r+nrat++gyWk+tgkd++
Lj5g3v1698980.1 5 LSPGFRFHPTDEELVGFYLKRRVTGRLFHG-DPIGIVDVYKYEPWDLPclSKMKTRDLEWYFYSGLDKKYGKgSSRTNRATEKGYWKTTGKDRP 97
579************************999.89***************6448888999*************94569****************** PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyr 127
v + +++vg+kktLv++ grap+g +t+Wvmheyr
Lj5g3v1698980.1 98 VNH-ANRTVGMKKTLVYHFGRAPTGARTNWVMHEYR 132
***.8999***************************9 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009644 | Biological Process | response to high light intensity |
| GO:0009962 | Biological Process | regulation of flavonoid biosynthetic process |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005737 | Cellular Component | cytoplasm |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 596 aa
Download sequence Send
to blast |
MSSNLSPGFR FHPTDEELVG FYLKRRVTGR LFHGDPIGIV DVYKYEPWDL PCLSKMKTRD 60
LEWYFYSGLD KKYGKGSSRT NRATEKGYWK TTGKDRPVNH ANRTVGMKKT LVYHFGRAPT 120
GARTNWVMHE YRSVDEVLAQ SGVAQDAYVL CRIFEKSGAG PKNGEKYGAP LIEEEWDNFD 180
MISPLAAFGD EYINEVPDVD GLLETKDLDQ DQDQKHVAPL APLAVVDDKL MNGVLDDGDF 240
METNDLDKKL DMPAVAIGSA DFPSNFHYGE CSSLPEYSQA FISDRKLLED TMGNSGPENH 300
QPFNMAQQYG ADTNAGNDGG DTGELSYDEK PLNFDCLDSL AQGLNPNWSP LNLDEILETD 360
DLANLAEGNP AEADSSVIGM VDEYLSYTED DIYKYICFDS PGNEGSEIAI PDQGPQPIQQ 420
NVEVETRDIS VASKPVFEAQ SSNEASLKQH VHQTSKFVSE DSNPIVKHAH KLLASMPAPP 480
AFASEFPTKG FALGLHPGAQ SSNTTHIAGM ISITDITLRG NAMDWMVGKN GGFNATIMSS 540
GFSQSDFNSD SLMPISDLVS SKTTCVLSHG CLYLMGFSVL ILSLSFKIGS YMYTAK
|
| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Lja.7358 | 0.0 | cell culture| floral bud| pod| protoplast| root |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP010523 | 0.0 | AP010523.1 Lotus japonicus genomic DNA, chromosome 5, clone: LjT23O16, TM1810, complete sequence. |
| GenBank | AP010524 | 0.0 | AP010524.1 Lotus japonicus genomic DNA, chromosome 5, clone: LjT34P16, TM1824, complete sequence. |
