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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj5g3v1015130.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
bHLH |
Protein Properties |
Length: 285aa MW: 30516.5 Da PI: 6.4052 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj5g3v1015130.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 29.5 | 1.3e-09 | 134 | 178 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
h+++Er RR+ri +++ L+el+P+ + K + a +L + v+Y+k L
Lj5g3v1015130.1 134 HSIAERLRRERIAERIRALQELVPSvN------KTDRAVMLDEIVDYVKFL 178
99***********************55......****************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 285 aa
Download sequence Send
to blast |
MANHPSDAPA ADDFLEQILG LPNFASADGT DASSLHAPMM LQLNSGDLAA GGAGFHSPVY 60 QLGLSLDQGK GGGFLKPDDA SGSGNRFRED VVVGARHKNA FHGQPMPTTV PSAPHPPPMR 120 PRVRARRGQA TDPHSIAERL RRERIAERIR ALQELVPSVN KTDRAVMLDE IVDYVKFLRL 180 QVKVLSMSRL GGAGAVAPLV TDIPLSSVEE EGGEGGRNQP AWEKWSNDGT EKQVAKLMEE 240 NIGAAMQFLQ SKALCIMPIS LASAIYQSQP SENSSIVKPE TSPPS
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Lja.6234 | 0.0 | cell culture| floral bud| pod| protoplast| root |
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}. |
Functional Description ? help
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Source |
Description |
UniProt | Required for ovule fertilization. {ECO:0000269|PubMed:15634699}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP009763 | 1e-165 | AP009763.1 Lotus japonicus genomic DNA, clone: LjT09J11, TM1923, complete sequence. |
GenBank | FJ379747 | 1e-165 | FJ379747.1 Lotus japonicus putative basic helix-loop-helix protein BHLH4 gene, complete cds. |