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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Lj5g3v0889480.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
| Family |
C2H2 |
| Protein Properties |
Length: 287aa MW: 31778.1 Da PI: 8.2454 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj5g3v0889480.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 13.6 | 0.00019 | 222 | 244 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+Cp Cg Fs+ +L+ H ++ H
Lj5g3v0889480.1 222 QCPQCGAKFSSVTTLVEHVQKvH 244
7******************9988 PP
|
| 2 | zf-C2H2 | 17.7 | 9.9e-06 | 259 | 281 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+Cp+C+k F+++ +L+ H + H
Lj5g3v0889480.1 259 VCPKCSKGFRDPVSLVEHVERdH 281
7*****************99888 PP
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| Protein Features
? help Back to Top |
 |
| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| SuperFamily | SSF118310 | 1.07E-12 | 6 | 50 | No hit | No description |
| Gene3D | G3DSA:4.10.1110.10 | 1.4E-10 | 10 | 50 | IPR000058 | Zinc finger, AN1-type |
| PROSITE profile | PS51039 | 7.595 | 10 | 59 | IPR000058 | Zinc finger, AN1-type |
| Pfam | PF01428 | 1.7E-13 | 13 | 51 | IPR000058 | Zinc finger, AN1-type |
| SMART | SM00154 | 0.0037 | 13 | 52 | IPR000058 | Zinc finger, AN1-type |
| SuperFamily | SSF118310 | 1.28E-8 | 57 | 143 | No hit | No description |
| Gene3D | G3DSA:4.10.1110.10 | 7.5E-11 | 91 | 158 | IPR000058 | Zinc finger, AN1-type |
| PROSITE profile | PS51039 | 7.803 | 98 | 147 | IPR000058 | Zinc finger, AN1-type |
| Pfam | PF01428 | 4.4E-8 | 101 | 141 | IPR000058 | Zinc finger, AN1-type |
| SMART | SM00154 | 0.21 | 101 | 142 | IPR000058 | Zinc finger, AN1-type |
| PROSITE profile | PS50157 | 9.64 | 221 | 249 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 0.0029 | 221 | 244 | IPR015880 | Zinc finger, C2H2-like |
| SuperFamily | SSF57667 | 2.05E-5 | 222 | 277 | No hit | No description |
| Pfam | PF13894 | 3.7E-4 | 222 | 244 | No hit | No description |
| PROSITE pattern | PS00028 | 0 | 223 | 244 | IPR007087 | Zinc finger, C2H2 |
| PROSITE profile | PS50157 | 9.037 | 258 | 286 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 5.5 | 258 | 281 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE pattern | PS00028 | 0 | 260 | 281 | IPR007087 | Zinc finger, C2H2 |
| Sequence ? help Back to Top |
| Protein Sequence Length: 287 aa
Download sequence Send
to blast |
MGTPEFPDLG KHCAVSDCKL VDFLPFTCDR CNQVYCLEHR SYIRHQCTKA DKLDLTVVIC 60
PLCAKGVRLV PDQDPNITWE NHVNTDCDPS NYEKVTKKKK CPAAGCKEIL VFSNTIKCRD 120
CMLDHCLKHR FGPDHKCPGP KKLETSFPFL SLLNKNRKEE RKPNSSSTPS SSKWSSSFLN 180
AASNIRASAE AGMSKLSGEI NQVWQTTKDG VGQNSGSEHV EQCPQCGAKF SSVTTLVEHV 240
QKVHERSGNQ SGVRVAIDVC PKCSKGFRDP VSLVEHVERD HGGSSRA
|
| Functional Description ? help
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| Source |
Description |
| UniProt | May be involved in environmental stress response. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By cold, dehydration and salt stress. {ECO:0000269|PubMed:17033811}. |
| Annotation -- Protein
? help Back to Top |
| Source |
Hit ID |
E-value |
Description |
| Refseq | XP_027366855.1 | 0.0 | zinc finger AN1 and C2H2 domain-containing stress-associated protein 11 isoform X1 |
| Swissprot | Q0D5B9 | 1e-126 | SAP16_ORYSJ; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 |
| TrEMBL | A0A1S2Z2C7 | 1e-176 | A0A1S2Z2C7_CICAR; zinc finger AN1 and C2H2 domain-containing stress-associated protein 16-like |
| STRING | XP_004513765.1 | 1e-177 | (Cicer arietinum) |
