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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj5g3v0404820.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
GATA |
Protein Properties |
Length: 310aa MW: 34435.3 Da PI: 9.9127 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj5g3v0404820.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 59 | 6.2e-19 | 175 | 208 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
Cs C+t++TplWR+gp+g+k+LCnaCG+++rk +
Lj5g3v0404820.1 175 CSDCNTSSTPLWRSGPNGPKSLCNACGIRQRKAR 208
*******************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 310 aa
Download sequence Send
to blast |
MTPVSLNPPG PSIQGQNHLF NSLNNQDYHA SLFNILDRRQ GIGIGELREN DHQDDKLVVW 60 HDGSSSSSSS NHLYNSTFIS PQPVMDNPSS STCDPNLSFS KMEEEDIKNV HGSAKWMSSK 120 MRLMKKMMST PATDKANNST TIPISPRIQN QGHENRYSQR SPRNNNNSSN TTRVCSDCNT 180 SSTPLWRSGP NGPKSLCNAC GIRQRKARRA MAEAANGLAT PINTASTKTR VHHNKEKKPR 240 ANHFAQFKNK SKSTSSNAGS SQETKKLECF KDFAISLRNN STFQQVFPRD EVAEAALLLM 300 DLSCGYVHSY
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP004486 | 0.0 | AP004486.1 Lotus japonicus genomic DNA, chromosome 5, clone: LjT05B20, TM0019a, complete sequence. |