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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Lj5g3v0165540.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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| Family |
DBB |
| Protein Properties |
Length: 308aa MW: 33625.8 Da PI: 7.6859 |
| Description |
DBB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj5g3v0165540.1 | genome | Kazusa | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-B_box | 19.8 | 1.7e-06 | 4 | 43 | 5 | 38 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
C+ +++ e++ fC+ ++ lC+ C H+ H+
Lj5g3v0165540.1 4 QCDVCSKDEASVFCTADEAALCDGCDHRVHHAnklaskHQ 43
7******99*******************964446777765 PP
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| 2 | zf-B_box | 24.3 | 6.3e-08 | 54 | 92 | 2 | 38 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg...Ht 38
+ + C+ ++e ++ fC++++ lC++C +++H + Ht
Lj5g3v0165540.1 54 QHPLCDICQERKAFMFCQQDRAILCKECDMSIH-SvneHT 92
5689******99*********************.436665 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 308 aa
Download sequence Send
to blast |
MKIQCDVCSK DEASVFCTAD EAALCDGCDH RVHHANKLAS KHQRFSLHTP SSKQHPLCDI 60
CQERKAFMFC QQDRAILCKE CDMSIHSVNE HTQKHDRFLL TGVKLSATPK LYSSASTAST 120
PSKTKSGLTN SSDAKSKPSF SSCSKSNLSH QGLIAKTVPS VESVLPHTTT INKVGGSLVT 180
MAGTGSTSSI SEYLIETLPG WQVEDLLDSY VVPFGFSKGD HDILQQFDDA GIEGNLCSFS 240
PNNNGIWVPQ APPPLYSSQM DRVFGQSVTK EGGTTNIKGS SRSRLRDDVF TVPQISPDST 300
SKRTRYLW
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that acts as positive regulator of seedling photomorphogenesis (PubMed:17965270). Acts downstream of COP1 and play an important role in early and long-term adjustment of the shade avoidance syndrome (SAS) responses in natural environments (PubMed:21070414). {ECO:0000269|PubMed:17965270, ECO:0000269|PubMed:21070414}. |
| Publications
? help Back to Top |
- Xu D, et al.
BBX21, an Arabidopsis B-box protein, directly activates HY5 and is targeted by COP1 for 26S proteasome-mediated degradation.
Proc. Natl. Acad. Sci. U.S.A., 2016. 113(27): p. 7655-60
[PMID:27325768] - Xu DB, et al.
The G-Protein β Subunit AGB1 Promotes Hypocotyl Elongation through Inhibiting Transcription Activation Function of BBX21 in Arabidopsis.
Mol Plant, 2017. 10(9): p. 1206-1223
[PMID:28827171] - Xu D,Jiang Y,Li J,Holm M,Deng XW
The B-Box Domain Protein BBX21 Promotes Photomorphogenesis.
Plant Physiol., 2018. 176(3): p. 2365-2375
[PMID:29259103] - Job N,Yadukrishnan P,Bursch K,Datta S,Johansson H
Two B-Box Proteins Regulate Photomorphogenesis by Oppositely Modulating HY5 through their Diverse C-Terminal Domains.
Plant Physiol., 2018. 176(4): p. 2963-2976
[PMID:29439209] - Crocco CD,Ocampo GG,Ploschuk EL,Mantese A,Botto JF
Heterologous Expression of AtBBX21 Enhances the Rate of Photosynthesis and Alleviates Photoinhibition in Solanumtuberosum.
Plant Physiol., 2018. 177(1): p. 369-380
[PMID:29555784] - Kang X, et al.
HRB2 and BBX21 interaction modulates Arabidopsis ABI5 locus and stomatal aperture.
Plant Cell Environ., 2018. 41(8): p. 1912-1925
[PMID:29748960]
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