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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj4g3v2618490.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
HSF |
Protein Properties |
Length: 398aa MW: 45348.5 Da PI: 5.2278 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj4g3v2618490.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 108.9 | 3.7e-34 | 14 | 105 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelle 95
Fl k+ye+++d++ ++++sws++++sfvv+++ +fa+++Lp++Fkh+nf+SF+RQLn+YgF+kv+ e+ weF+++ F +g+ +l++
Lj4g3v2618490.1 14 FLAKTYEMVDDPSSDRIVSWSATNRSFVVWNPPDFARELLPRFFKHNNFSSFIRQLNTYGFRKVDPEQ---------WEFANDGFVRGEPHLMK 98
9********************999****************************************9998.........***************** PP
XXXXXXX CS
HSF_DNA-bind 96 kikrkks 102
+i+r+k
Lj4g3v2618490.1 99 NIHRRKP 105
****985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0000302 | Biological Process | response to reactive oxygen species |
GO:0010200 | Biological Process | response to chitin |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 398 aa
Download sequence Send
to blast |
MDEAQNSSSS LPPFLAKTYE MVDDPSSDRI VSWSATNRSF VVWNPPDFAR ELLPRFFKHN 60 NFSSFIRQLN TYGFRKVDPE QWEFANDGFV RGEPHLMKNI HRRKPVHSHS MQNLQAHAPL 120 GESERKSLND EIEKLKHNKE RLLMELQRHQ HEWQPYEIQL NCLKEQLEKL EQKQQKMVSS 180 VSQVLHKPVI ALNLLPPTET MDRKRRLPGG GYFNDEASIE DAVDTSQMLP RENAEGASVL 240 TLNMERLDQL ESSMLFWETI AHESGETFIH IHTNMDVDES TSCADSLSIS CPQLEVEVRS 300 KSSGIDMNSE PTAAAVLEPV ASKEQPAGKA AATGVNDVFW EQFLTEDPGA SEAQEVQSER 360 KEYNGRKSEG KPTDHGRFWW NARNANNLPE QVGHVSQA
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP004978 | 0.0 | AP004978.1 Lotus japonicus genomic DNA, chromosome 4, clone: LjT44L05, TM0162a, complete sequence. |