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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Lj4g3v2263940.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
| Family |
WRKY |
| Protein Properties |
Length: 417aa MW: 45469.3 Da PI: 7.9799 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj4g3v2263940.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 103 | 1.7e-32 | 219 | 277 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDg++WrKYGqK vk+s++prsYYrCt+agC vkk+vers+ed++vv++tYeg H+h+
Lj4g3v2263940.1 219 LDDGFRWRKYGQKAVKNSPNPRSYYRCTTAGCGVKKRVERSSEDTSVVVTTYEGVHTHR 277
59********************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 417 aa
Download sequence Send
to blast |
MEEKREKAEK SFSCSTMSNS VAFSDTGNPS FGSIFSFLME KMPPPPPSPP LPPLSPLPLP 60
PFHQQTSSFG SFKDLLTIED FDPALFDWNP TTTTNTAAAA DVTSPPLSTT QISHPVPSPA 120
TSNILPEYSS DVLNTPTTPN SSSISSSTNG TGNDRAEPEP EAENDDDGDA IKDQNQNQNK 180
NGLKGKKQKQ EKQEKKEKKE KKEKEPRYAF KTKSEVDNLD DGFRWRKYGQ KAVKNSPNPR 240
SYYRCTTAGC GVKKRVERSS EDTSVVVTTY EGVHTHRCPA ARGNYGGAAP HGLGSNQYVL 300
PSQAQNLQVQ NFQNQNVQQA APSFSTTPSF NAATPVPPIS YRNAIIPLPF NVANPAPNTH 360
FNTSSFGSFL QGINGVDFVQ SSRFMANNNQ GLLRNNGLLQ DMFVPAHMEF GGGGGRR
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1wj2_A | 9e-26 | 211 | 280 | 9 | 78 | Probable WRKY transcription factor 4 |
| 2lex_A | 9e-26 | 211 | 280 | 9 | 78 | Probable WRKY transcription factor 4 |
