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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj4g3v1787030.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
TCP |
Protein Properties |
Length: 388aa MW: 44052.8 Da PI: 7.2151 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj4g3v1787030.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 135.7 | 4e-42 | 124 | 268 | 3 | 134 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssas.nsssg....... 88
k+drhski T++g+RdRR+Rls+e+a+rfF Lqd+LGfdk+skt++WLl+qak +ik l++ ++ ++ +c+ ++ssss+s + g
Lj4g3v1787030.1 124 SKRDRHSKINTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVDWLLNQAKVEIKHLAREKNLHHPSCSGAKSSSSTSeGE--Gvsgldev 215
69*************************************************************999999994444444444123..13467777 PP
TCP 89 ......kaaksaa.kskksqksaasalnlakesrakarararertrekmrikn 134
+++k+++ k++ ++ ++++++ r+kar+rarertrek r+k+
Lj4g3v1787030.1 216 visenqEQEKEQQpIVKRRANKVCRKSAFNAIGREKARERARERTREKLRTKK 268
777776444444447777777777888999999****************9984 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 388 aa
Download sequence Send
to blast |
MFSSNSSLNG NDLISSSSYP NNNQAFIFSR HFSFESNLTS KDETNCPLSL LQFPYSPFED 60 HENIFPEQHH DFSLQQHQSL PEPVVNNNMD ASINNNKNNS IPGTCSVVGK GTATEQVAVR 120 RRSSKRDRHS KINTARGLRD RRMRLSLEVA KRFFGLQDML GFDKASKTVD WLLNQAKVEI 180 KHLAREKNLH HPSCSGAKSS SSTSEGEGVS GLDEVVISEN QEQEKEQQPI VKRRANKVCR 240 KSAFNAIGRE KARERARERT REKLRTKKLA DDKESKQCKE VTNHNLNLWN PFETVEESAG 300 THQSQSVNNH PSLDLLAEAE KEPSSQAKEN SGTVVDDDMS HEDSFLIMSK WSPTMMFNSL 360 SNSEILQEHQ FAEFQPLGKQ WEAYNNRI
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP009629 | 0.0 | AP009629.1 Lotus japonicus genomic DNA, chromosome 4, clone: LjB15O07, BM1698, complete sequence. |