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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj4g3v0654660.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
bHLH |
Protein Properties |
Length: 383aa MW: 43398.9 Da PI: 5.4717 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj4g3v0654660.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 36.2 | 1.1e-11 | 215 | 257 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
+ E+ RR+++N ++ Lr+l+P++ +K++ a+++ A++YIk+L
Lj4g3v0654660.1 215 ATEKDRREQLNGKYKILRSLIPSP-----TKPDRASVVGDAIDYIKEL 257
78**********************.....9****************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 383 aa
Download sequence Send
to blast |
MVPENTTNNN NNIMDNHLVK EVIDASPYQQ STWDPNVQEL QDMSYANHQE QQFQHIDAQN 60 YCQSYNPSSI LDPSYPSPDL LNFLHLPTCS ASSLLTNPPN ICISNPTQRT PNFQNSMTFL 120 GELPMGPDNT SASSVLYDPL FHLNLPPQPP ALRELFQSLP RGYRLPTSSR DDSLFGGGDE 180 MEGDGSQLDM GVLEFNRGTT SVGKGREGKG AKPFATEKDR REQLNGKYKI LRSLIPSPTK 240 PDRASVVGDA IDYIKELIRT VNELKLLVEK KRHERERCKR PKNEEDAEES CNIKPFGDPD 300 GYIRTSWLQR KSKESEVDVR IIDDDVTIKF FQRKKINCLL FVSKVLDELQ LELHHLAGGH 360 VGEYWSFLFN SKVGVSLDMI LIK
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP009066 | 0.0 | AP009066.1 Lotus japonicus genomic DNA, chromosome 4, clone: LjT07D18, TM0256, complete sequence. |
GenBank | BT136391 | 0.0 | BT136391.1 Lotus japonicus clone JCVI-FLLj-19K6 unknown mRNA. |
GenBank | FJ379760 | 0.0 | FJ379760.1 Lotus japonicus putative basic helix-loop-helix protein BHLH14 gene, complete cds. |