|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lj4g3v0571920.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
Family |
G2-like |
Protein Properties |
Length: 325aa MW: 36669.7 Da PI: 9.4418 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj4g3v0571920.1 | genome | Kazusa | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 103.4 | 1.4e-32 | 262 | 317 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+peLH+rFv+a+++LGGs+ AtPk+i+elm+v+gLt+++vkSHLQkYRl+
Lj4g3v0571920.1 262 KQRRCWSPELHRRFVNALQKLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLH 317
79****************************************************97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 325 aa
Download sequence Send
to blast |
MGSVPAELSL DLRPSFVPKT VANFLYELST IPRSTDKLSR LHDFLARLED ELRKIDAFKR 60 ELPLCMLLLN DAILVLKEES EKCRAHNSPP VLEEFIPLKK EHDQSEENDS KENECRDKKN 120 WMSSVQLWNN TTPRKACDQI PIQHLNYKLD TKKNEEGNSV VAEDPFQSCN VKNGGSAFLP 180 FSTYSSIPVT TVALQAAKEE KEDTVLNRLS LLTPGVKSLR EGFGSRGSRS SSSSRAVSSS 240 SPPIVPPSLR AGSLQQQQNA RKQRRCWSPE LHRRFVNALQ KLGGSQAATP KQIRELMQVD 300 GLTNDEVKSH LQKYRLHRQP LISRV
|
3D Structure ? help Back to Top |
|
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4k_A | 2e-14 | 262 | 318 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-14 | 262 | 318 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 3e-14 | 262 | 318 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 3e-14 | 262 | 318 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 3e-14 | 262 | 318 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 3e-14 | 262 | 318 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-14 | 262 | 318 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-14 | 262 | 318 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-14 | 262 | 318 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-14 | 262 | 318 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-14 | 262 | 318 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-14 | 262 | 318 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | BT144399 | 1e-111 | BT144399.1 Lotus japonicus clone JCVI-FLLj-20H9 unknown mRNA. |