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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj4g3v0386050.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
GATA |
Protein Properties |
Length: 356aa MW: 39028.5 Da PI: 5.0714 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj4g3v0386050.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 51.3 | 1.6e-16 | 195 | 231 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35
C++Cgt++ Tp +Rrgp g+++LCnaCGl+++ kg+
Lj4g3v0386050.1 195 CQHCGTSEksTPAMRRGPAGPRSLCNACGLMWANKGT 231
**********************************997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0005515 | Molecular Function | protein binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 356 aa
Download sequence Send
to blast |
MDMVLNPCQN REGSLMMAAA APMQVDGVHF ANGADEGQHA PATVAASASN ASAPHPRAGE 60 LTISFEGEVY VFPAVTPEKV QAVLLLLGQK DIPNSTPNSG LLQQKNFPQI KGINDPSQSS 120 NLSRRFASLV RFREKRKERC FEKKIRYTCR KEVAQRMHRK NGQFASLKED YKSPAGNLDS 180 SNGTPPCPES IERRCQHCGT SEKSTPAMRR GPAGPRSLCN ACGLMWANKG TLRDLSKAAK 240 TPYEQNERDT SADMKPSTTE PENSCADQAE EGTPEENKPV PMDSRETPEK KNEQDILGTA 300 QTVTDNLSIQ LENHALSLDE QDIEDLADAS GTEFGIPAGF DDQIDIDVSN MRTYWL
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Predominantly expressed in shoot apices, inflorescences and roots. {ECO:0000269|PubMed:14966217}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250, ECO:0000269|PubMed:14966217}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP006358 | 1e-130 | AP006358.1 Lotus japonicus genomic DNA, chromosome 4, clone: LjT36C13, TM0100b, complete sequence. |