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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj4g3v0070880.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
FAR1 |
Protein Properties |
Length: 681aa MW: 78077.1 Da PI: 6.8818 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj4g3v0070880.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 68.7 | 1.5e-21 | 74 | 157 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89
++Y YAkevGF vr+++s +++++e + + ++Cs +g++++++ + + r+etrtgC a+++++ ++++w+++++ leHnH l
Lj4g3v0070880.1 74 NYYICYAKEVGFCVRVKNSWFKRNSREKYGAVLCCSSQGFKRTKDVN-----HLRKETRTGCPAMMRIRIAESQRWRIIEVILEHNHIL 157
5899**************************************99988.....999********************************87 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 681 aa
Download sequence Send
to blast |
MVKLGSIQQT TFGEMEETSL CCEDLPHGEC IEVHKDEDAA LIELDSQNGF SEGRKEFDAP 60 AVGMEFESYD DAYNYYICYA KEVGFCVRVK NSWFKRNSRE KYGAVLCCSS QGFKRTKDVN 120 HLRKETRTGC PAMMRIRIAE SQRWRIIEVI LEHNHILGAK IHKSAKKMGN GTKRKSLPSS 180 DSEVQTVKLY RPLVIDAGGN GNLNPSARDD RTFSEMSNKL NVKRGDTQAI YNFLCRMQLT 240 NPNFFYLMDF DDEGHLRNAF WADARSRAAC GYFGDVIYFD NTYLSSKYEI PLVVFVGINH 300 HGQSVLLGCG LLAGETTESY IWLFRTWVTC MSGCSPQTII TDRCEALQSA IIEVFPKSHH 360 CFGLSLIMKK VPEKLGGLHN YDGIRKALIK AVYETLKISE FEAAWGIMIQ RFGVSDHEWL 420 RSLYEDRVRW APVFLKDVFF GGMSAARPGE SIGPFFGRYV HKQTPLKEFL DKYELALHKK 480 HKEESLADTE SRNSSPVLKT RCSLELQLSR MYTREIFMKF QFEVEEMFSC FGTTQLHVDG 540 PIVIYLVKER VLIDGNRREI KDFEVVYSRA AGELRCICSC FNFYGYLCRH ALCVLNFNGV 600 EEIPFKYILS RWKKDYKRLH VPDHSSVSAD DTDPIQWSNQ LFSSALQVVE EGTISLDHYN 660 VALQACEESL SKVHDVDQRQ D
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in hypocotyls, rosette and cauline leaves, inflorescences stems, flowers and siliques. {ECO:0000269|PubMed:15591448}. |
Functional Description ? help
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Source |
Description |
UniProt | Putative transcription activator involved in regulating light control of development. May have a role in controlling flowering time. {ECO:0000269|PubMed:15591448}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP004908 | 0.0 | AP004908.1 Lotus japonicus genomic DNA, chromosome 6, clone: LjT12N11, TM0066, complete sequence. |