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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj4g3v0037580.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
NAC |
Protein Properties |
Length: 406aa MW: 46101.6 Da PI: 7.3181 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj4g3v0037580.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 160.3 | 7.7e-50 | 33 | 158 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
+pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekewyf+++rd+ky++g+r+nr+t+sgyWkatg d+ + ++
Lj4g3v0037580.1 33 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTE 125
79***************************.89***************8778899**************************************** PP
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ + +glkktLvfy+g+apkg +t+W+m+eyrl
Lj4g3v0037580.1 126 NFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 158
*******************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 406 aa
Download sequence Send
to blast |
MSHEDGTTTT TTSSANENSN KQLLDDHEND TVMPGFRFHP TEEELVEFYL RRKVEGKRFN 60 VELITFLDLY RYDPWELPAL AAIGEKEWYF YVPRDRKYRN GDRPNRVTTS GYWKATGADR 120 MIRTENFRSI GLKKTLVFYS GKAPKGIRTS WIMNEYRLPQ HETERYQKAE ISLCRVYKRA 180 GVEDHPSLPR CLPITKQPSS SRSSKPSEIA QHQYLPHNMG LFLGQSNSKP VHDGQIVENH 240 ETEGISSTGS GSGSEHHVTT ALGLSKYNAY RAAVGSLSNT NTIGLPAEEE GLMLLPQHHQ 300 SNNPKQPPNN SLVHACFPAN AVPSNNNNNN VVMMDDLNRL VSYQPQFFNV QSHPNHQLSA 360 LLMQTAPPMS LNSLPNTLPT TFSDRLWDWN PIPEVNQDHP NIMPFK
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 3e-55 | 34 | 179 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-55 | 34 | 179 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-55 | 34 | 179 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-55 | 34 | 179 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
4dul_A | 3e-55 | 34 | 179 | 19 | 165 | NAC domain-containing protein 19 |
4dul_B | 3e-55 | 34 | 179 | 19 | 165 | NAC domain-containing protein 19 |
Search in ModeBase |
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in aerial organs in early stages of seedling development. {ECO:0000269|PubMed:17653269}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that acts as a floral repressor. Controls flowering time by negatively regulating CONSTANS (CO) expression in a GIGANTEA (GI)-independent manner. Regulates the plant cold response by positive regulation of the cold response genes COR15A and KIN1. May coordinate cold response and flowering time. {ECO:0000269|PubMed:17653269}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Circadian regulation with a peak of expression at dawn under continuous light conditions (PubMed:17653269). Circadian regulation with a peak of expression around dusk and lowest expression around dawn under continuous light conditions (at protein level) (PubMed:17653269). {ECO:0000269|PubMed:17653269}. |