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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj3g3v3639490.1 |
Common Name | MYB101 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
MYB |
Protein Properties |
Length: 349aa MW: 39245.4 Da PI: 6.641 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj3g3v3639490.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 60.4 | 4e-19 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd +lvd+++++G g+W++ ++ g++R++k+c++rw +yl
Lj3g3v3639490.1 15 KGPWTPEEDAILVDYIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 62
79********************************************97 PP
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2 | Myb_DNA-binding | 58.3 | 1.8e-18 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T+eE++l++++++ lG++ W++Ia +++ gRt++++k++w+++l
Lj3g3v3639490.1 68 RGKFTEEEEQLIINLHAVLGNK-WSAIAGHLP-GRTDNEIKNFWNTHL 113
89********************.*********.************996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 349 aa
Download sequence Send
to blast |
MMGRTPCCDE IGLKKGPWTP EEDAILVDYI QKHGHGSWRA LPKLAGLNRC GKSCRLRWTN 60 YLRPDIKRGK FTEEEEQLII NLHAVLGNKW SAIAGHLPGR TDNEIKNFWN THLKKKLLQM 120 GLDPVTHRPR LDHLNLLSNL QQFLAATNMV TSFTNTLDSN AALRLQSDAT QLAKLQLLQN 180 ILQVLGTNPA SNLELLNQLG PSSSISDTFL HEALGLNQSK LQELYKSSIV FPSHQNLSNL 240 QTLEVPHHLQ QHYMNGSSTI NSCMQSRKVV DEQLDATNSS STIPLNSLPN LVSASPQCST 300 VKEMENKVNP NECSNPSSTS TTFEMWGDFM CEEVNDDYWK DLIDQESNR
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Specifically and transiently expressed in root endodermal cells overlying the early stages of lateral root primordia formation. {ECO:0000269|PubMed:24902892, ECO:0000269|PubMed:25482809}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that acts as negative regulator of lateral root (LR) development. Required for normal auxin responses during LR development. May be part of a negative feedback loop stimulated specifically in the endodermis upon LR initiation to ensure that LRs are formed only in the correct place. {ECO:0000269|PubMed:24902892}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by abscisic acid (ABA), auxin and gravity in roots. {ECO:0000269|PubMed:24902892}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB108648 | 0.0 | AB108648.1 Lotus japonicus MYB101 gene for transcription factor MYB101, complete cds. |