PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj3g3v2990310.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | NAC | ||||||||
Protein Properties | Length: 94aa MW: 11018.6 Da PI: 10.8582 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 25.5 | 3.7e-08 | 1 | 23 | 106 | 128 |
NAM 106 LvfykgrapkgektdWvmheyrl 128 +vfykg+ap+g+kt+W m+eyr+ Lj3g3v2990310.1 1 MVFYKGKAPSGRKTKWKMNEYRA 23 89*******************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.32E-9 | 1 | 48 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 15.671 | 1 | 50 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 94 aa Download sequence Send to blast |
MVFYKGKAPS GRKTKWKMNE YRAIQVSNNQ SSTATPQLRR EFSLCRVYVI SGSFRSFDRR 60 PLKNERVESR LVHDEAGNFP LRGTPWWCWC GRGC |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj3g3v2990310.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013455804.1 | 4e-35 | NAC domain-containing protein 90 | ||||
Swissprot | Q9FMR3 | 1e-23 | NAC90_ARATH; NAC domain-containing protein 90 | ||||
TrEMBL | B7FI49 | 2e-35 | B7FI49_MEDTR; Uncharacterized protein | ||||
STRING | XP_004506197.1 | 6e-33 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF871 | 34 | 123 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 6e-26 | NAC domain containing protein 90 |
Publications ? help Back to Top | |||
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