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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj3g3v2886960.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
MYB |
Protein Properties |
Length: 334aa MW: 38214.9 Da PI: 4.592 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj3g3v2886960.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 46.3 | 9.5e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g WT+eEd +l +v+++G +W+ ++ g+ R++k+c++rw++yl
Lj3g3v2886960.1 14 KGTWTAEEDRKLTAYVTRYGCWNWRQLPKFAGLARCGKSCRLRWLNYL 61
799*****************99************************97 PP
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2 | Myb_DNA-binding | 59.8 | 6.1e-19 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+ T+eE+e++++ +k+lG++ W+tIa++++ gRt++++k++w++
Lj3g3v2886960.1 67 RGNYTQEEEEIIIRMHKKLGNR-WSTIAAELP-GRTDNEVKNHWHT 110
899*******************.*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MARTPSCDKS GMRKGTWTAE EDRKLTAYVT RYGCWNWRQL PKFAGLARCG KSCRLRWLNY 60 LRPNIKRGNY TQEEEEIIIR MHKKLGNRWS TIAAELPGRT DNEVKNHWHT SLKRRVHEQN 120 ATTNQETKVL NSKNVESTSG RDHVSKNGSA SLQVTFPETS QFSDSTGSLP PFSSSSEFSC 180 ISSELTTTSS SIEKLVFEDD FDFLDAFTEH VNENFWSDSE KFDLANISYT PNETVMQIDT 240 NFALQNQDTT QIFDACALSP NQSSSDSLVL DNDLGSFLDA NTDPTIDDFW RQPYVTDTSF 300 AAESEYFSTV YDAADDLWSQ SNLYDEQHFC LFYF
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP009750 | 0.0 | AP009750.1 Lotus japonicus genomic DNA, chromosome 3, clone: LjT47O18, TM1899, complete sequence. |