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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj3g3v2057510.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
GATA |
Protein Properties |
Length: 306aa MW: 33572.9 Da PI: 6.5065 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj3g3v2057510.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 51.8 | 1.1e-16 | 226 | 262 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35
C++Cgt++ Tp++Rrgp+g++tLCnaCGl+++ kg+
Lj3g3v2057510.1 226 CRHCGTSEkcTPMMRRGPEGPRTLCNACGLMWANKGT 262
**********************************997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0005515 | Molecular Function | protein binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MDSINGGDSR THISDEQHSL LGPYVQEHEH HELHHMSNGN GIDDDQNNGD NTNCGGGESV 60 EGEVPSNHGN IHDNHTVMVD QASDGGDQLT LSFQGQVYVF DSVSPDKVQA VLLLLGGREI 120 PPTGPAMPVS PHQNNRGFSG TPPKFSVPQR IASLIRFHEK RKERNFEKKI RYTVRKEVAL 180 RMQRNKGQFT STKSNHDEST SNATNWGTNE NWTGDNNGSQ QQDIVCRHCG TSEKCTPMMR 240 RGPEGPRTLC NACGLMWANK GTLRDLSRAA ALMPGPNSSL NKNENKNPEA SQIVLRVPGD 300 ADESSS
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Predominantly expressed in shoot apices, inflorescences and roots. {ECO:0000269|PubMed:14966217}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250, ECO:0000269|PubMed:14966217}. |