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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj3g3v1075120.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
GATA |
Protein Properties |
Length: 289aa MW: 32247.8 Da PI: 9.1397 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj3g3v1075120.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 58.7 | 8e-19 | 224 | 257 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
C +C +tkTp+WR+gp g+ktLCnaCG++yr+ +
Lj3g3v1075120.1 224 CMHCEVTKTPQWREGPMGPKTLCNACGVRYRSGR 257
99*****************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 289 aa
Download sequence Send
to blast |
MNDSWLLDEM LDDPKFFDFP MEDLEPNAME EDWAAQFKRL NEPCFDAFSV VAPLGHCGET 60 QNEKPQLGKG FPASCTGISP IKQPRKTSGP TYGKTIPKQN VAFNGKDLHR LRTYSPVSVF 120 ESSSSSSVEN SNFDLPVIPA KRARSKRLRP SSCSSLFSVP FILNSPALRK HQSTPASESD 180 LETGDAEKLL NKAKKQRKKD LFMLSDDAEM KRFSSQGSAV PRKCMHCEVT KTPQWREGPM 240 GPKTLCNACG VRYRSGRLFP EYRPAASPTF VPAVHSNCHK KVLEMRGAI
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP009649 | 0.0 | AP009649.1 Lotus japonicus genomic DNA, chromosome 3, clone: LjT10E18, TM0035, complete sequence. |