PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj3g3v0741510.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | bHLH | ||||||||
Protein Properties | Length: 387aa MW: 42710.2 Da PI: 7.4766 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 18.5 | 3.8e-06 | 358 | 384 | 4 | 30 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 4 ahnerErrRRdriNsafeeLrellPka 30 +h+ +Er RR++i +++ L++l+P + Lj3g3v0741510.1 358 SHSLAERVRREKISERMKLLQDLVPGC 384 8************************75 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.56E-4 | 352 | 386 | No hit | No description |
SuperFamily | SSF47459 | 2.22E-7 | 352 | 386 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 11.776 | 354 | 387 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.3E-7 | 354 | 386 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 387 aa Download sequence Send to blast |
MENQFFLNAG VSHPMQFEPS PPPNSSMPTW QSLSSAMEIQ SNVLNYPSEQ TQDFFYSSTW 60 DKSTDHHHQP LQFDSALSSM VSSPAESNEN FVMRELIGKL GAVGNSDHEI SPHSHHNSCY 120 STPLSSPPKL NHIAPMMMNH LVKENFPKPM ALNSSVAEFS ADPGFAERAA KFSCFGSRSF 180 NERRSTTSQL VVNNNAELAP QRSATVIENG RLHRVSSSPS LKTFGSQLQD HEKMEVANSQ 240 EESTISEQTP NGELGVKASD TNPRKRKASS KGKAKEPSNY FNPTKGVEGS GEETNAKRSK 300 QNEGEGNENS PTKVEVESKG GARNSGEEKQ NKGNTTKPPE PPKDYIHVRA RRGQATDSHS 360 LAERVRREKI SERMKLLQDL VPGCNKV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj3g3v0741510.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015037 | 8e-32 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027336099.1 | 1e-167 | transcription factor bHLH62-like | ||||
TrEMBL | A0A371HQB3 | 1e-161 | A0A371HQB3_MUCPR; Transcription factor bHLH62 (Fragment) | ||||
STRING | GLYMA18G32560.1 | 1e-150 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2530 | 34 | 80 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07340.1 | 1e-66 | bHLH family protein |