|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Lj3g3v0741510.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
Family |
bHLH |
Protein Properties |
Length: 387aa MW: 42710.2 Da PI: 7.4766 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj3g3v0741510.1 | genome | Kazusa | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 18.5 | 3.8e-06 | 358 | 384 | 4 | 30 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
HLH 4 ahnerErrRRdriNsafeeLrellPka 30
+h+ +Er RR++i +++ L++l+P +
Lj3g3v0741510.1 358 SHSLAERVRREKISERMKLLQDLVPGC 384
8************************75 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 387 aa
Download sequence Send
to blast |
MENQFFLNAG VSHPMQFEPS PPPNSSMPTW QSLSSAMEIQ SNVLNYPSEQ TQDFFYSSTW 60 DKSTDHHHQP LQFDSALSSM VSSPAESNEN FVMRELIGKL GAVGNSDHEI SPHSHHNSCY 120 STPLSSPPKL NHIAPMMMNH LVKENFPKPM ALNSSVAEFS ADPGFAERAA KFSCFGSRSF 180 NERRSTTSQL VVNNNAELAP QRSATVIENG RLHRVSSSPS LKTFGSQLQD HEKMEVANSQ 240 EESTISEQTP NGELGVKASD TNPRKRKASS KGKAKEPSNY FNPTKGVEGS GEETNAKRSK 300 QNEGEGNENS PTKVEVESKG GARNSGEEKQ NKGNTTKPPE PPKDYIHVRA RRGQATDSHS 360 LAERVRREKI SERMKLLQDL VPGCNKV
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP015037 | 8e-32 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |