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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Lj3g3v0381570.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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| Family |
DBB |
| Protein Properties |
Length: 270aa MW: 29788.5 Da PI: 4.552 |
| Description |
DBB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj3g3v0381570.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-B_box | 24.8 | 4.6e-08 | 4 | 44 | 5 | 39 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
C+ +e+ +++ C ++ lC++C +e+H H++
Lj3g3v0381570.1 4 QCDACEKAPATVICCADEAALCAQCDVEIHAAnklaskHQR 44
7*****************************65667777765 PP
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| 2 | zf-B_box | 28 | 4.7e-09 | 53 | 86 | 2 | 35 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHk 35
+ +kC+ ++ek + +fC +++ l+C+dC + +H
Lj3g3v0381570.1 53 KLPKCDICQEKTAFIFCVEDRALFCQDCDEPIHA 86
789***************************9994 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 270 aa
Download sequence Send
to blast |
MKIQCDACEK APATVICCAD EAALCAQCDV EIHAANKLAS KHQRLLLESL SNKLPKCDIC 60
QEKTAFIFCV EDRALFCQDC DEPIHAPGSI SANHQRFLAT GIKVAGSSKC TKDDEKSHLE 120
PPSRNASKIS AKIPPQQVPN FTEKIPPQQV PNFTEKVPPQ QVPNFTSSWA VDDLLDMELS 180
SFDSPDKYAQ KDSLQFGELE WLADDGLFGD QFSQEALAAA EVPQLPATYT SSNVASYRTS 240
KSPMSNKKAR IEVLHYDEDD DEYFTVPNLG
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: High expression in leaves and lower in roots and flowers. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Acts as negative regulator of seedling photomorphogenesis and light-regulated inhibition of hypocotyl elongation (PubMed:17605755, PubMed:18540109, PubMed:21685177). BBX24/STO and BBX25/STH function as transcriptional corepressors of HY5 activity, leading to the down-regulation of BBX22 expression. BBX24/STO acts additively with BBX25/STH during de-etiolation and the hypocotyl shade avoidance response (PubMed:23624715). Functions as negative regulator of photomorphogenic UV-B responses by interacting with both COP1 and HY5 (PubMed:22410790). May act as a transcription factor in the salt-stress response (PubMed:12909688). {ECO:0000269|PubMed:12909688, ECO:0000269|PubMed:17605755, ECO:0000269|PubMed:18540109, ECO:0000269|PubMed:21685177, ECO:0000269|PubMed:22410790, ECO:0000269|PubMed:23624715}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Circadian regulation with a peak before dawn. {ECO:0000269|PubMed:17605755}. |
| Publications
? help Back to Top |
- Gangappa SN,Holm M,Botto JF
Molecular interactions of BBX24 and BBX25 with HYH, HY5 HOMOLOG, to modulate Arabidopsis seedling development.
Plant Signal Behav, 2014.
[PMID:23733077] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Imtiaz M, et al.
Identification and functional characterization of the BBX24 promoter and gene from chrysanthemum in Arabidopsis.
Plant Mol. Biol., 2015. 89(1-2): p. 1-19
[PMID:26253592] - Job N,Yadukrishnan P,Bursch K,Datta S,Johansson H
Two B-Box Proteins Regulate Photomorphogenesis by Oppositely Modulating HY5 through their Diverse C-Terminal Domains.
Plant Physiol., 2018. 176(4): p. 2963-2976
[PMID:29439209]
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