PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj2g3v3337320.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family SAP
Protein Properties Length: 387aa    MW: 42940 Da    PI: 8.415
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj2g3v3337320.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP632.67.3e-193238678455
              SAP  78 qvcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGa 171
                      qvcstwr+vsrsdllwqrltrriWrrt++lrdtW+ ey+++hrtarnf++++ys+v++ f+p+  + d++++al+Cr+l+lsd++la+Gf+dG+
  Lj2g3v3337320.1   2 QVCSTWREVSRSDLLWQRLTRRIWRRTYRLRDTWQLEYVFWHRTARNFSMGNYSLVVPPFSPP-LAGDHHPQALICRYLTLSDNHLACGFIDGT 94 
                      9*************************************************************8.8999************************** PP

              SAP 172 vrlfdletrlhvstflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvp 265
                      vrlfdl+t++hvstf++++++++G+fsr+vsGivis s+l+fa+ldGdi+vavid++g  +arral Gdvvn+G+lv+f+GsgrW+vGl+aG++
  Lj2g3v3337320.1  95 VRLFDLQTQAHVSTFWSNQGHLFGPFSRSVSGIVISGSALTFARLDGDIYVAVIDVPG--PARRALPGDVVNNGVLVEFVGSGRWCVGLFAGHA 186
                      ********************************************************55..9********************************* PP

              SAP 266 GrafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvv 359
                      G+af+iWda+te++vfvGGsltdPe+v GWhmltel+e vGr+rvtere++vaCt +rlv+f++rn++v+lr++ +r+G++v+sld+s+e++vv
  Lj2g3v3337320.1 187 GAAFQIWDAHTEQRVFVGGSLTDPETVLGWHMLTELVEPVGRLRVTEREVVVACTGSRLVCFNVRNPEVLLRDVGSRAGFVVGSLDVSHEGFVV 280
                      ********************************************************************************************** PP

              SAP 360 vdsrGvatvrrvenleevcrfrvrg..aqrgvlgCvnggyalvyagg..vlrvWeiekkeg.ylyslrervg.....evnalvaddrhvavsss 443
                      v+++G++tvrrv n+e+v+rfr+++  + rg+lgC+n+gy+++y+gg  +lrvW++++ +g +++++++r g     ++n++va+++hvavs++
  Lj2g3v3337320.1 281 VERNGMGTVRRVGNFERVSRFRLSStsWLRGLLGCMNLGYVVTYSGGsgLLRVWDTHHPVGrLCVEVAVRPGeaaqgYANSMVASQTHVAVSFN 374
                      ***********************9999*******************9889*********999********998888899*************** PP

              SAP 444 dgtihlldfgaq 455
                      dg ihlldf++q
  Lj2g3v3337320.1 375 DGLIHLLDFSVQ 386
                      **********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF813836.98E-6244IPR001810F-box domain
Gene3DG3DSA:1.20.1280.502.9E-4246No hitNo description
Gene3DG3DSA:2.130.10.104.6E-782132IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF693221.7E-1283384No hitNo description
Gene3DG3DSA:2.130.10.104.6E-7178277IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.104.6E-7319336IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.103.2E-4353382IPR015943WD40/YVTN repeat-like-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MQVCSTWREV SRSDLLWQRL TRRIWRRTYR LRDTWQLEYV FWHRTARNFS MGNYSLVVPP  60
FSPPLAGDHH PQALICRYLT LSDNHLACGF IDGTVRLFDL QTQAHVSTFW SNQGHLFGPF  120
SRSVSGIVIS GSALTFARLD GDIYVAVIDV PGPARRALPG DVVNNGVLVE FVGSGRWCVG  180
LFAGHAGAAF QIWDAHTEQR VFVGGSLTDP ETVLGWHMLT ELVEPVGRLR VTEREVVVAC  240
TGSRLVCFNV RNPEVLLRDV GSRAGFVVGS LDVSHEGFVV VERNGMGTVR RVGNFERVSR  300
FRLSSTSWLR GLLGCMNLGY VVTYSGGSGL LRVWDTHHPV GRLCVEVAVR PGEAAQGYAN  360
SMVASQTHVA VSFNDGLIHL LDFSVQL
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj2g3v3337320.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0089520.0AP008952.1 Lotus japonicus genomic DNA, chromosome 2, clone: LjT45D07, TM0932b, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003617930.10.0transcriptional regulator STERILE APETALA
TrEMBLA0A2Z6PF570.0A0A2Z6PF57_TRISU; Uncharacterized protein
STRINGAET008890.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76873146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.13e-89SAP family protein