 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Lj2g3v3058520.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
| Family |
LBD |
| Protein Properties |
Length: 352aa MW: 40360.2 Da PI: 7.0579 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj2g3v3058520.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 30.4 | 1.1e-09 | 8 | 55 | 1 | 49 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal 49
+CaaCk+lrr+C+++Cv+ap + + ++k +++ ++ F n+ +l ++l
Lj2g3v3058520.1 8 RCAACKILRRNCTQNCVFAPLY-EPHNKMLQFQQECFQSPNIPNLFNNL 55
6*******************96.33446677778888888888888776 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006511 | Biological Process | ubiquitin-dependent protein catabolic process |
| Sequence ? help Back to Top |
| Protein Sequence Length: 352 aa
Download sequence Send
to blast |
MESGRNSRCA ACKILRRNCT QNCVFAPLYE PHNKMLQFQQ ECFQSPNIPN LFNNLVSEMA 60
ATTQSEVPSG AVDSTGKAKH RMLFNEEEGY KDGLMHLHFM NLCTSEHGRL LVKQRLVACS 120
SIEGVIDIKT CKKNFKDWFK QIRREPDNQF QKHLNDFITL MNSPDFRIFC YNIYQSTERV 180
PLLPTPHVSQ DTISLRSSDK VVFEMNKMVA ISESKLLKDV IECHPNEDEI PVPRVSSLVL 240
PEVISFCEKK LKFDQLFKSI GEILKTVFIP YQAWVTRFVN NNHSIFSHLH DAANFLNIPS 300
LFEFTSLFTG LQDRGENENK IQETSKWYSA SSMLSTMGID IGEASYISLN FG
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP009645 | 0.0 | AP009645.1 Lotus japonicus genomic DNA, chromosome 2, clone: LjB15M17, BM2010, complete sequence. |
