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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj2g3v3034090.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
C2H2 |
Protein Properties |
Length: 466aa MW: 51866 Da PI: 6.9361 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj2g3v3034090.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 12.9 | 0.00033 | 114 | 136 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+Cp+C+++F++ ++ H t+
Lj2g3v3034090.1 114 YECPICKQPFRSEEEVSEHVDTC 136
99**************9999877 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 466 aa
Download sequence Send
to blast |
MGDMKDKVKG FMKKVNNPFT SSSSGKFKGQ GRVLGSSSSS SSSSAPINPN RNPTPRLTPT 60 QNPNPNSKPR PASTTNHEPS RRKTDRNPGD GFDPFDSLVT SSNRSQNGYS LNVYECPICK 120 QPFRSEEEVS EHVDTCLSTP AEGDCEKGVS ELALTEAESQ NSELEVCVGT FLSGNPSEGS 180 LDVVLKLLRN IAREPENVKF RKIRMSNPKI KEAVAEVTGG IELLSFLGFE LREENGDTWA 240 VMEVPTEEQI KVIKKALVLL EPPLVEQPSK RDNLVTSTSA EKDVKAEPKK VDRQVKVFFA 300 VPESVAAKIE LPDSFYKLSA EEVRREAELR RKKLEESQLL IPKSLREKQA KAARRRYTKT 360 IIRIQFPDGV VLQGVFSPWE PTTALYEFVS SALKEQALEF ELMHPVVIKR RVIPHFPKAG 420 ENAKTIEEED LVPSALIKFK PLETDSVVFT GLRNELLEIS EPLVNS
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Functional Description ? help
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Source |
Description |
UniProt | Facilitates the interaction of SYP31 and CDC48A, thereby regulating an CDC48A membrane-associated function (Ref.8). Appears to act as a negative regulator mediating the powdery mildew-plant interaction (PubMed:19176722, PubMed:23301616). {ECO:0000269|PubMed:19176722, ECO:0000269|PubMed:23301616, ECO:0000269|Ref.8}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced in response to powdery mildew and by benzothiadiazole (BTH) treatment. {ECO:0000269|PubMed:19176722}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP004536 | 0.0 | AP004536.1 Lotus japonicus genomic DNA, chromosome 4, clone: LjT15N19, TM0097b, complete sequence. |
Publications
? help Back to Top |
- Suzuki T,Park H,Till EA,Lennarz WJ
The PUB domain: a putative protein-protein interaction domain implicated in the ubiquitin-proteasome pathway. Biochem. Biophys. Res. Commun., 2001. 287(5): p. 1083-7 [PMID:11587532] - Rancour DM,Park S,Knight SD,Bednarek SY
Plant UBX domain-containing protein 1, PUX1, regulates the oligomeric structure and activity of arabidopsis CDC48. J. Biol. Chem., 2004. 279(52): p. 54264-74 [PMID:15498773] - Chandran D,Rickert J,Cherk C,Dotson BR,Wildermuth MC
Host cell ploidy underlying the fungal feeding site is a determinant of powdery mildew growth and reproduction. Mol. Plant Microbe Interact., 2013. 26(5): p. 537-45 [PMID:23301616]
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