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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Lj2g3v2114130.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family | ERF | ||||||||
Protein Properties | Length: 205aa MW: 22504.3 Da PI: 4.5404 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.8 | 2.3e-17 | 24 | 73 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr +k +g+Wv+eIr+p gk++r++lg++ +e+Aa+a++ a+ l+g+ Lj2g3v2114130.1 24 YRGVRKRK-WGKWVSEIREP---GKKTRIWLGSYEQPEMAAAAYDVAAFHLKGH 73 9****999.**********8...557***********************99986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 22.352 | 23 | 80 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.5E-34 | 23 | 86 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.07E-21 | 23 | 81 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 8.4E-31 | 23 | 81 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.8E-11 | 24 | 73 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.4E-12 | 24 | 35 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.46E-19 | 24 | 82 | No hit | No description |
PRINTS | PR00367 | 3.4E-12 | 62 | 82 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence Send to blast |
MEEETNSTVQ EQSVIAAATA TKAYRGVRKR KWGKWVSEIR EPGKKTRIWL GSYEQPEMAA 60 AAYDVAAFHL KGHAARLNFP ELAETMPRPA SSKAEDVVLA AQQAALMLKR SSPPPPMPEG 120 GSGGGGAPDP AAVRVGLSPA QIQAINECPM DSPNMWMQMA ADTLMFDDES MKTVYSNCNG 180 DDEVMELSGW EETQFEYKSL WDSWS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 2e-16 | 22 | 80 | 4 | 63 | ATERF1 |
3gcc_A | 2e-16 | 22 | 80 | 4 | 63 | ATERF1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Lj2g3v2114130.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020230149.1 | 5e-67 | ethylene-responsive transcription factor ERF022 | ||||
TrEMBL | A0A151SD08 | 1e-65 | A0A151SD08_CAJCA; Ethylene-responsive transcription factor ERF021 family | ||||
STRING | AES93881 | 5e-63 | (Medicago truncatula) | ||||
STRING | XP_007157008.1 | 1e-62 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1777 | 31 | 91 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71450.1 | 3e-46 | ERF family protein |