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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Lj2g3v2089740.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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Family |
GRAS |
Protein Properties |
Length: 474aa MW: 53428.3 Da PI: 5.96 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Lj2g3v2089740.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 456.4 | 1.7e-139 | 49 | 471 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94
l++lLl+cA++v++g+le+a+ +L+++s+laspdgd+mqR+aayfteALa r+++++++l +al++++ +see+ ++klf+e++P+lk++
Lj2g3v2089740.1 49 LIHLLLTCANHVAAGSLENANITLEQISQLASPDGDTMQRIAAYFTEALADRILKTWPGLHRALNSTRIV--MVSEEILVQKLFFELFPFLKVA 140
689*************************************************************988886..69******************** PP
GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
++++NqaI ea+ege++vHiiD+++ +++QW+aLlq L++Rpeg+p+lRiTgv++ +ke l +++++L++ Ae+l++pf+fn+ v ++le+
Lj2g3v2089740.1 141 YILTNQAIIEAMEGEKMVHIIDLNAAEPAQWIALLQVLSARPEGTPHLRITGVHQ----QKEILDQMAHKLTEEAEKLDIPFQFNP-VLSKLEN 229
*******************************************************....9**************************.799**** PP
GRAS 189 leleeLrvkpgEalaVnlvlqlhrll..........................................................desvsleser 224
l++++Lrvk+gEala+++++qlh+ll ++++s++
Lj2g3v2089740.1 230 LDFDKLRVKTGEALAISSIMQLHSLLalddesgrrkspllskhsngihlqkvllmnqntlgdflkkdmvnsyspstdsassspvSSTTSMNA-- 321
******************************************************************************99876555555555.. PP
GRAS 225 devLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrer 318
+++L+++++lsPkv+vv+eq+++hn+++++er+leal+ y+alfd+le++++r+s erikvE++l+g+ei+n++acegaer+erhe+l kW +r
Lj2g3v2089740.1 322 ESFLNALWGLSPKVLVVTEQDSNHNGSTLMERLLEALYSYAALFDCLESTVSRTSLERIKVEKMLFGEEIKNIIACEGAERKERHEKLDKWLQR 415
99******************************************************************************************** PP
GRAS 319 leeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
l+ +GF++ pls++ + qa++ l+ ++ +gyr+ ee+gs+v++W+dr+L+s++aWr
Lj2g3v2089740.1 416 LDVSGFSNTPLSYYGMLQARRFLQSYGCEGYRMREENGSVVMCWQDRSLFSTTAWR 471
*******************************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 474 aa
Download sequence Send
to blast |
MESMLQEEGS SSVTSSPLQF FSMMSLSPSI GSPYPWLREL KSEERGLYLI HLLLTCANHV 60 AAGSLENANI TLEQISQLAS PDGDTMQRIA AYFTEALADR ILKTWPGLHR ALNSTRIVMV 120 SEEILVQKLF FELFPFLKVA YILTNQAIIE AMEGEKMVHI IDLNAAEPAQ WIALLQVLSA 180 RPEGTPHLRI TGVHQQKEIL DQMAHKLTEE AEKLDIPFQF NPVLSKLENL DFDKLRVKTG 240 EALAISSIMQ LHSLLALDDE SGRRKSPLLS KHSNGIHLQK VLLMNQNTLG DFLKKDMVNS 300 YSPSTDSASS SPVSSTTSMN AESFLNALWG LSPKVLVVTE QDSNHNGSTL MERLLEALYS 360 YAALFDCLES TVSRTSLERI KVEKMLFGEE IKNIIACEGA ERKERHEKLD KWLQRLDVSG 420 FSNTPLSYYG MLQARRFLQS YGCEGYRMRE ENGSVVMCWQ DRSLFSTTAW RPRK
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, root epidermis, leaves, flowers and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP004485 | 0.0 | AP004485.1 Lotus japonicus genomic DNA, chromosome 2, clone: LjT08D14, TM0018, complete sequence. |