PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj2g3v2016210.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family ERF
Protein Properties Length: 152aa    MW: 16721.6 Da    PI: 3.8867
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj2g3v2016210.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.64e-103342155
              AP2 21 dpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     +p++   +kr++lg+f t+e+Aa+a++ a+++l+g
  Lj2g3v2016210.1  3 VPND---TKRIWLGTFPTPEMAARAHDVAALALRG 34
                     5522...4*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.89E-20144No hitNo description
PROSITE profilePS5103214.855142IPR001471AP2/ERF domain
SMARTSM003805.5E-8148IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.4E-18244IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-12344IPR016177DNA-binding domain
PfamPF008476.8E-6734IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
MRVPNDTKRI WLGTFPTPEM AARAHDVAAL ALRGQSACLN FADSAWLLTV PASTDADEIR  60
RAAVAAAESF APGNEVMEDA NQTLQQQQQE QEQGMMYGEE EVAAAVPEFE DFHDLLMSIA  120
NGPLLSPPPP ARDGRDWNDV EMFDDGVSLW NF
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj2g3v2016210.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020216025.12e-57dehydration-responsive element-binding protein 1E
TrEMBLA0A151TJQ54e-56A0A151TJQ5_CAJCA; Dehydration-responsive element-binding protein 1F
STRINGGLYMA01G42500.26e-54(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24333224
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.11e-14ERF family protein